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| Uses of DataBuffer in uk.ac.ebi.adfconverter.common.data |
| Methods in uk.ac.ebi.adfconverter.common.data that return DataBuffer | |
DataBuffer |
DataBuffer.concat(DataBuffer buff)
Concats the current DataBuffer with another databuffer |
DataBuffer |
DataBuffer.toLowerCase()
Retrieves the databuffer in lower case |
DataBuffer |
DataBuffer.toUpperCase()
Retrieves the databuffer in upper case |
| Methods in uk.ac.ebi.adfconverter.common.data with parameters of type DataBuffer | |
DataBuffer |
DataBuffer.concat(DataBuffer buff)
Concats the current DataBuffer with another databuffer |
void |
DataBuffer.append(DataBuffer buff)
Appends the DataBuffer to the current one Add the String og the databuffer to the end of the current one |
| Uses of DataBuffer in uk.ac.ebi.adfconverter.common.data.tabulardata |
| Methods in uk.ac.ebi.adfconverter.common.data.tabulardata that return DataBuffer | |
DataBuffer |
DataRow.getDataBuffer(int location)
Retrieves the DataBuffer value contained in the specified location. |
DataBuffer |
DataRow.getDataBuffer(java.lang.String label)
Retrieves the DataBuffer value located
under specified column label. |
DataBuffer |
DataRow.getDataBuffer(int location,
java.lang.String defaultVal)
Retrieves the String value contained in the specified location or defaultVal if it
does not. |
DataBuffer |
DataRow.getDataBuffer(java.lang.String label,
java.lang.String defaultVal)
Retrieves the String value contained
under the specified column label. |
| Methods in uk.ac.ebi.adfconverter.common.data.tabulardata with parameters of type DataBuffer | |
void |
DataRow.add(DataBuffer datum)
Adds a DataBuffer datum to the next location in the row |
void |
DataRow.add(DataBuffer datum,
int position)
Adds a databuffer datum at a given position in the current row |
| Uses of DataBuffer in uk.ac.ebi.adfconverter.common.tools.file.converter |
| Methods in uk.ac.ebi.adfconverter.common.tools.file.converter that return DataBuffer | |
DataBuffer |
TextLineConverter.format(DataRow row)
Formats the data contained in the DataRow object into a line of data following the text file format. |
DataBuffer |
TextLineConverter.format(DataTableHeader header)
Formats the header item list object into a line of data following the text file format. |
static DataBuffer |
DelimiterLineConverter.format(DataRow row)
Format a DataRow following the current delimiter for output |
static DataBuffer |
DelimiterLineConverter.format(DataTableHeader header)
Format a DataHeaderRow following the current delimiter for output |
| Methods in uk.ac.ebi.adfconverter.common.tools.file.converter with parameters of type DataBuffer | |
DataRow |
TextLineConverter.convertLine(DataBuffer line)
Converts a line of data into a DataRow object which contains each data item in individual cells. |
DataRow |
TextLineConverter.convertLine(DataBuffer line,
int length)
Converts a line of data into a DataRow object which contains each data item in individual cells. |
static DataRow |
DelimiterLineConverter.convertLine(DataBuffer line)
Splits a String (file data line) following the current delimiter and the current escape characters |
static DataRow |
DelimiterLineConverter.convertLine(DataBuffer line,
int length)
Splits a String (file data line) following the current delimiter and the current escape characters, with a limited number of exporting token in output DataRow |
| Uses of DataBuffer in uk.ac.ebi.adfconverter.common.tools.file.reader |
| Methods in uk.ac.ebi.adfconverter.common.tools.file.reader that return DataBuffer | |
DataBuffer |
WorkBookFileReaderjxl.getLine()
Retrieves a line from a data file Only when termination requirements have been met, the method should return a String object.
|
DataBuffer |
PlainTextFileReader.getLine()
Retrieves a line from a data file Only when termination requirements have been met, the method should return a String object.
|
abstract DataBuffer |
ADFConverterFileReaderImpl.getLine()
Retrieves a line from a data file Only when termination requirements have been met, the method should return a String object.
|
DataBuffer |
ADFConverterFileReader.getLine()
Retrieves a line from a data file Only when termination requirements have been met, the method should return a String object.
|
| Uses of DataBuffer in uk.ac.ebi.adfconverter.common.tools.file.writer |
| Methods in uk.ac.ebi.adfconverter.common.tools.file.writer with parameters of type DataBuffer | |
void |
WorkBookFileWriterjxl.writeLine(DataBuffer line)
Write a line ina data file Only when termination requirements have been met, the method should return a String object.
|
void |
PlainTextFileWriter.writeLine(DataBuffer line)
Retrieves a line from a data file Only when termination requirements have been met, the method should return a String object.
|
abstract void |
ADFConverterFileWriterImpl.writeLine(DataBuffer line)
Write a line in a data file. |
void |
ADFConverterFileWriter.writeLine(DataBuffer line)
Write a line in a data file |
| Uses of DataBuffer in uk.ac.ebi.adfconverter.common.util.pool |
| Methods in uk.ac.ebi.adfconverter.common.util.pool that return DataBuffer | |
static DataBuffer |
DataBufferPool.getString()
Retrieved a previous initialised/ created object from the pool. |
| Methods in uk.ac.ebi.adfconverter.common.util.pool with parameters of type DataBuffer | |
static void |
DataBufferPool.returnString(DataBuffer sb)
Returns a no more needed object to the pool for reuse. |
| Uses of DataBuffer in uk.ac.ebi.adfconverter.tools.checker |
| Methods in uk.ac.ebi.adfconverter.tools.checker that return DataBuffer | |
static DataBuffer |
DatabaseChecker.checkDBTag(ADFConverterLogger log,
DataBuffer tag,
boolean doCuration,
java.util.ArrayList userDefinedTags,
boolean isStrictChecking)
Checks if a DB tag is an approved Databases or a userdefined one. |
| Methods in uk.ac.ebi.adfconverter.tools.checker with parameters of type DataBuffer | |
static DataBuffer |
DatabaseChecker.checkDBTag(ADFConverterLogger log,
DataBuffer tag,
boolean doCuration,
java.util.ArrayList userDefinedTags,
boolean isStrictChecking)
Checks if a DB tag is an approved Databases or a userdefined one. |
| Uses of DataBuffer in uk.ac.ebi.adfconverter.tools.checker.ontology |
| Methods in uk.ac.ebi.adfconverter.tools.checker.ontology with parameters of type DataBuffer | |
boolean |
MGEDOntologyChecker.checkontologyTerm(ADFConverterLogger log,
java.lang.String type,
DataBuffer value)
Check if a term belong to the MGED ontology |
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