Uses of Class
uk.ac.ebi.adfconverter.common.data.tabulardata.CorrectableDataTable

Packages that use CorrectableDataTable

uk.ac.ebi.adfconverter.common.util.pool
uk.ac.ebi.adfconverter.data.adf
uk.ac.ebi.adfconverter.tools.checker

Uses of CorrectableDataTable in uk.ac.ebi.adfconverter.common.util.pool

Methods in uk.ac.ebi.adfconverter.common.util.pool that return CorrectableDataTable

static CorrectableDataTable

CorrectableDataTablePool.getItem() Retrieved a previous initialised/ created object from the pool.

Methods in uk.ac.ebi.adfconverter.common.util.pool with parameters of type CorrectableDataTable

static void

CorrectableDataTablePool.returnItem(CorrectableDataTable sb) Returns a no more needed CorrectableDataTable object to the pool for reuse.

Uses of CorrectableDataTable in uk.ac.ebi.adfconverter.data.adf

Methods in uk.ac.ebi.adfconverter.data.adf that return CorrectableDataTable

CorrectableDataTable	ADFJava.getHeaderTable() retrieves the ADF header table
CorrectableDataTable	ADFJava.getFeatureTable() retrieves the ADF feature table
CorrectableDataTable	ADFJava.getReporterTable() retrieves the ADF reporter table * @return the associated ADF reporter table
CorrectableDataTable	ADFJava.getCompositeSequenceTable() retrieves the ADF compositeSequences table
CorrectableDataTable	ADFJava.getBiosequencesTable() retrieves the ADF biosequences table
CorrectableDataTable	ADFJava.getTable(java.lang.String tableName) Retrieves a table following a given name

Constructors in uk.ac.ebi.adfconverter.data.adf with parameters of type CorrectableDataTable

ADFJava(CorrectableDataTable header)
testing purpose

ADFJava(CorrectableDataTable header, CorrectableDataTable features, CorrectableDataTable reporters, CorrectableDataTable CompositeSequences, CorrectableDataTable bioSequences, java.util.Hashtable ReporterGroupList, java.util.Hashtable CompositeSequenceList)
ADFJava class Constructor with associated elements (header, feature, reporter, CompositeSequence biosequence, and group lists.

Uses of CorrectableDataTable in uk.ac.ebi.adfconverter.tools.checker

Methods in uk.ac.ebi.adfconverter.tools.checker that return CorrectableDataTable

CorrectableDataTable	OptimizedFileChecker.checkFileAndCurate(java.io.File checkFile, java.lang.String fileStructure, boolean strictMode, boolean stepByStepMode) Checks and curates a data file.
CorrectableDataTable	OptimizedFileChecker.checkFileAndCurate(java.io.File checkFile, java.lang.String fileStructure, java.lang.String structureName, boolean strictMode, boolean stepByStepMode) Checks and curates a data file.
CorrectableDataTable	OptimizedFileChecker.getCuratedTable() Retrieves the curated data table for the current data file
CorrectableDataTable	FileChecker.checkFileAndCurate(java.io.File checkFile, FileType fileStructure, boolean strictMode, boolean stepByStepMode) Checks and curates a data file.
CorrectableDataTable	FileChecker.getCuratedTable() Retrieves the curated data table for the current data file
CorrectableDataTable	FileChecker.checkTableAndCurate(DataTable table, HeaderType headerStructure, boolean strictMode, boolean stepByStepMode) checks a data table against a structure file and returns the corrected/curated (if needed) data table