uk.ac.ebi.adfconverter.tools.exporter
Class MAGEMLExporter
java.lang.Object
uk.ac.ebi.adfconverter.tools.exporter.MAGEMLExporter
- public class MAGEMLExporter
- extends java.lang.Object
Class used to export MAGE objects in a MAGE-ML file
Due to the JAVA MAGEstk, a temporary file is created first and this file is red to
obtain a "pretty" xml file with header, doctype and indentation
- Version:
- 1 01 August 2004
- Author:
- Pierre MARGUERITE
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Constructor Summary |
MAGEMLExporter(java.lang.String dtdPath,
java.lang.String _dtdPublicDoctype,
java.lang.String _dtdSystemDoctype)
Constructor of th MAGE-ML exporter
specified the dtd file for all MAGE-ML file
THe user can specified a doctype a system one (local file system)
or public one (web).
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Method Summary |
static void |
export(java.io.File ADFFile,
MAGEJava mageJava)
Export a MAGEJava object in a MAGE-ML file
create a temporay file in the temp directory (can be an issue), before obtaining
a pretty and well form MAGE-File |
| Methods inherited from class java.lang.Object |
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
MAGEMLExporter
public MAGEMLExporter(java.lang.String dtdPath,
java.lang.String _dtdPublicDoctype,
java.lang.String _dtdSystemDoctype)
throws MAGEMLExporterInitException
- Constructor of th MAGE-ML exporter
specified the dtd file for all MAGE-ML file
THe user can specified a doctype a system one (local file system)
or public one (web).
From good pratice, should be public as:
- Parameters:
dtdPath - the dtd path to test MAGE-ML before final export._dtdPublicDoctype - the public doctype for dtd declaration_dtdSystemDoctype - the system doctype for dtd declaration
- Throws:
MAGEMLExporterInitException - in case or error during the initialisation
export
public static void export(java.io.File ADFFile,
MAGEJava mageJava)
- Export a MAGEJava object in a MAGE-ML file
create a temporay file in the temp directory (can be an issue), before obtaining
a pretty and well form MAGE-File
- Parameters:
ADFFile - the converted ADF File (the adh)mageJava - the MAGEJava object to convert
European Bioinformatics InstituteMicroarray Informatics Team