uk.ac.ebi.adfconverter.usermode.commandline
Class ADFConverterCommandLine

java.lang.Object
  extended byuk.ac.ebi.adfconverter.usermode.commandline.ADFConverterCommandLine

public class ADFConverterCommandLine
extends java.lang.Object

Created on 12 sept. 2004 Class to access to the ADFConverter tool (the Library) by command line. Inits the application and treats data file. Available Options: -t || -text : for text format output -xls : for xls format output -c || -conf : for specific configuration file -check : For checking mode -conv : For conversion mode -strict : strict data checking mode -relax : relax data checking mode (default) -stepbystep : step by step checking mode -nostepbystep : no step by step checking mode (default) -dtd pathtoMAGE-MLDTD: path to the MAGE-ML dtd path -sort: sorting ADF in the given directory -curation: curation of ADFs and save into file -adf: The application only treats ADF files -mage: The application only treats MAGE-ML files -accnumberchecking: The database accession numbers will be checked against the database tag -ontologychecking: The MGED ontology term will be checked -I: Info logging level -D: Debug logging level

Since:
12 sept. 2004
Version:
1
Author:
Pierre MARGUERITE

Constructor Summary
ADFConverterCommandLine()
           
 
Method Summary
static void main(java.lang.String[] args)
          Main method the ADF converter launch by command-line
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

ADFConverterCommandLine

public ADFConverterCommandLine()
Method Detail

main

public static void main(java.lang.String[] args)
Main method the ADF converter launch by command-line

Parameters:
args - the arguments given in the command line


European Bioinformatics InstituteMicroarray Informatics Team